Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine (Articolo in rivista)

Type

• Prodotto della ricerca (Classe)
• Articolo in rivista (Classe)

Label

• Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine (Articolo in rivista) (literal)

Anno

• 2010-01-01T00:00:00+01:00 (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#doi

• 10.1016/j.virol.2010.09.001 (literal)

Alternative label

• Pantaleo V; Saldarelli P; Miozzi L; Giampetruzzi A; Gisel A; Moxon S; Dalmay T; Bisztray G; Burgyan J. (2010)
  Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine
  in Virology (N.Y.N.Y., Print)
  (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#autori

• Pantaleo V; Saldarelli P; Miozzi L; Giampetruzzi A; Gisel A; Moxon S; Dalmay T; Bisztray G; Burgyan J. (literal)

Pagina inizio

• 49 (literal)

Pagina fine

• 56 (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#url

• http://www.sciencedirect.com/science/article/pii/S0042682210005763 (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroVolume

• 408 (literal)

Rivista

• Virology (Rivista)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#pagineTotali

• 7 (literal)

Note

• ISI Web of Science (WOS) (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#affiliazioni

• Pantaleo V; Saldarelli P., Miozzi L. and Burgyan: Istituto di Virologia Vegetale del CNR Giampetruzzi A: Dipartimento di Protezione delle Piante e Microbiologia Applicata, Università di Bari, 70126 Bari, Italy Gisel A: Istituto di Tecnologie Biomediche del C.N.R., Sezione di Bari via Amendola 122/O, 70126, Bari, Italy Moxon S: School of Computing Sciences, University of East Anglia, NR4 7TJ, Norwich, UK Bisztray G: Corvinus University, Budapest, Hungary (literal)

Titolo

• Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine (literal)

Abstract

• Virus-derived short interfering RNAs (vsiRNAs) isolated from grapevine V. vinifera Pinot Noir clone ENTAV 115 were analyzed by high-throughput sequencing using the Illumina Solexa platform. We identified and characterized vsiRNAs derived from grapevine field plants naturally infected with different viruses belonging to the genera Foveavirus, Maculavirus, Marafivirus and Nepovirus. These vsiRNAs were mainly of 21 and 22 nucleotides (nt) in size and were discontinuously distributed throughout Grapevine rupestris stem-pitting associated virus (GRSPaV) and Grapevine fleck virus (GFkV) genomic RNAs. Among the studied viruses, GRSPaV and GFkV vsiRNAs had a 52 terminal nucleotide bias, which differed from that described for experimental viral infections in Arabidopsis thaliana. VsiRNAs were found to originate from both genomic and antigenomic GRSPaV RNA strands, whereas with the grapevine tymoviruses GFkV and Grapevine Red Globe associated virus (GRGV), the large majority derived from the antigenomic viral strand, a feature never observed in other plant–virus interactions. (literal)

Prodotto di

• Interazioni biologiche e molecolari delle piante con virus e agenti patogeni virus-simili (AG.P01.010.001) (Modulo)

Autore CNR

• PASQUALE SALDARELLI (Persona)
• LAURA MIOZZI (Unità di personale interno)
• VITANTONIO PANTALEO (Persona)
• JOZSEF BURGYAN (Persona)

Insieme di parole chiave

• Parole chiave di "Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine" (Insieme di parole chiave)

Incoming links:

Autore CNR di

• PASQUALE SALDARELLI (Persona)
• VITANTONIO PANTALEO (Persona)
• LAURA MIOZZI (Unità di personale interno)
• JOZSEF BURGYAN (Persona)

Prodotto

• Interazioni biologiche e molecolari delle piante con virus e agenti patogeni virus-simili (AG.P01.010.001) (Modulo)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#rivistaDi

• Virology (Rivista)

Insieme di parole chiave di

• Parole chiave di "Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine" (Insieme di parole chiave)