MoD Tools: Regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes (Articolo in rivista)

Type

• Prodotto della ricerca (Classe)
• Articolo in rivista (Classe)

Label

• MoD Tools: Regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes (Articolo in rivista) (literal)

Anno

• 2006-01-01T00:00:00+01:00 (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#doi

• 10.1093/nar/gkl285 (literal)

Alternative label

• Pavesi, Giulio; Mereghetti, Paolo; Zambelli, Federico; Stefani, Marco; Mauri, Giancarlo; Pesole, Graziano (2006)
  MoD Tools: Regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes
  in Nucleic acids research
  (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#autori

• Pavesi, Giulio; Mereghetti, Paolo; Zambelli, Federico; Stefani, Marco; Mauri, Giancarlo; Pesole, Graziano (literal)

Pagina inizio

• W566 (literal)

Pagina fine

• W570 (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#url

• http://www.scopus.com/record/display.url?eid=2-s2.0-33747829925&origin=inward (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroVolume

• 34 (literal)

Rivista

• Nucleic acids research (Rivista)

Note

• Scopu (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#affiliazioni

• Universita degli Studi di Milano; Universita degli Studi di Milano - Bicocca; Universita degli Studi di Bari; Consiglio Nazionale delle Ricerche (literal)

Titolo

• MoD Tools: Regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes (literal)

Abstract

• Understanding the complex mechanisms regulating gene expression at the transcriptional and post-transcriptional levels is one of the greatest challenges of the post-genomic era. The MoD (MOtif Discovery) Tools web server comprises a set of tools for the discovery of novel conserved sequence and structure motifs in nucleotide sequences, motifs that in turn are good candidates for regulatory activity. The server includes the following programs: Weeder, for the discovery of conserved transcription factor binding sites (TFBSs) in nucleotide sequences from co-regulated genes; WeederH, for the discovery of conserved TFBSs and distal regulatory modules in sequences from homologous genes; RNAProfile, for the discovery of conserved secondary structure motifs in unaligned RNA sequences whose secondary structure is not known. In this way, a given gene can be compared with other co-regulated genes or with its homologs, or itsmRNAcan be analyzed for conserved motifs regulating its post-transcriptional fate. The web server thus provides researchers with different strategies and methods to investigate the regulation of gene expression, at both the transcriptional and post-transcriptional levels. © The Author 2006. Published by Oxford University Press. All rights reserved. (literal)

Prodotto di

• Institute of biomembrane and bioenergetics (IBBE) (Istituto)
• STUDIO DELLA BIODIVERSITA' MOLECOLARE PER LO SVILUPPO DI PROCESSI E PRODOTTI INNOVATIVI (SV.P17.009.001) (Modulo)

Autore CNR

• GRAZIANO PESOLE (Persona)

Incoming links:

Prodotto

• Institute of biomembrane and bioenergetics (IBBE) (Istituto)
• STUDIO DELLA BIODIVERSITA' MOLECOLARE PER LO SVILUPPO DI PROCESSI E PRODOTTI INNOVATIVI (SV.P17.009.001) (Modulo)

Autore CNR di

• GRAZIANO PESOLE (Persona)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#rivistaDi

• Nucleic acids research (Rivista)