Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda). (Articolo in rivista)

Type

• Prodotto della ricerca (Classe)
• Articolo in rivista (Classe)

Label

• Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda). (Articolo in rivista) (literal)

Anno

• 2004-01-01T00:00:00+01:00 (literal)

Alternative label

• De Luca F., Reyes A., Grunder J., Kunz P., Agostinelli A., De Giorgi C., Lamberti F. (2004)
  Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda).
  in Journal of nematology
  (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#autori

• De Luca F., Reyes A., Grunder J., Kunz P., Agostinelli A., De Giorgi C., Lamberti F. (literal)

Pagina inizio

• 147 (literal)

Pagina fine

• 152 (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#url

• http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2620760/pdf/147.pdf (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroVolume

• 36 (literal)

Rivista

• Journal of nematology (Rivista)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#pagineTotali

• 6 (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroFascicolo

• 2 (literal)

Note

• ISI Web of Science (WOS), Scopus (literal)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#affiliazioni

• Reyes A.- CNR, Ist Tecnol Biomed, Sez Bioinformat & Genom, I-70125 Bari, Italy Grunder J.; Kunz P.- Swiss Fed Res Stn, Nematol Sect, CH-8820 Wadenswil, Switzerland De Giorgi C.- Univ Bari, Dipartimento Biochim & Biol Mol, I-70125 Bari, Italy (literal)

Titolo

• Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda). (literal)

Abstract

• Total DNA was isolated from individual nematodes of the species Longidorus helveticus, L. macrosoma, L. arthensis, L. profundorum, L. elongatus, and L. raskii collected in Switzerland. The ITS region and D1-D2 expansion segments of the 26S rDNA were amplified and cloned. The sequences obtained were aligned in order to investigate sequence diversity and to infer the phylogenetic relationships among the six Longidorus species. D1-D2 sequences were more conserved than the ITS sequences that varied widely in primary structure and length, and no consensus was observed. Phylogenetic analyses using the neighbor-joining, maximum parsimony and maximum likelihood methods were performed with three different sequence data sets: ITS1-ITS2, 5.8S-D1-D2, and combining ITS1-ITS2+5.8S-D1-D2 sequences. All multiple alignments yielded similar basic trees supporting the existence of the six species established using morphological characters. These sequence data also provided evidence that the different regions of the rDNA are characterized by different evolution rates and by different factors associated with the generation of extreme size variation. (literal)

Prodotto di

• Studio e sviluppo di strategie innovative di lotta per la protezione delle piante. (AG.P04.022.001) (Modulo)
• Istituto per la protezione delle piante (IPP) (Istituto)

Autore CNR

• AUGUSTA AGOSTINELLI (Unità di personale interno)
• FRANCESCA DE LUCA (Persona)
• FRANCO LAMBERTI (Unità di personale interno)

Insieme di parole chiave

• Parole chiave di "Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda)." (Insieme di parole chiave)

Incoming links:

Autore CNR di

• AUGUSTA AGOSTINELLI (Unità di personale interno)
• FRANCESCA DE LUCA (Persona)
• FRANCO LAMBERTI (Unità di personale interno)

Prodotto

• Istituto per la protezione delle piante (IPP) (Istituto)
• Studio e sviluppo di strategie innovative di lotta per la protezione delle piante. (AG.P04.022.001) (Modulo)

Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#rivistaDi

• Journal of nematology (Rivista)

Insieme di parole chiave di

• Parole chiave di "Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda)." (Insieme di parole chiave)