http://www.cnr.it/ontology/cnr/individuo/prodotto/ID248466
Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences (Articolo in rivista)
- Type
- Label
- Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences (Articolo in rivista) (literal)
- Anno
- 1999-01-01T00:00:00+01:00 (literal)
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#doi
- 10.1093/nar/27.1.134 (literal)
- Alternative label
Lanave, C.; Attimonelli, M.; De Robertis, M.; Licciulli, F.; Liuni, S.; Sbisa, E.; Saccone, C. (1999)
Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences
in Nucleic acids research
(literal)
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#autori
- Lanave, C.; Attimonelli, M.; De Robertis, M.; Licciulli, F.; Liuni, S.; Sbisa, E.; Saccone, C. (literal)
- Pagina inizio
- Pagina fine
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroVolume
- Rivista
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroFascicolo
- Note
- SCImago (literal)
- ISI Web of Science (WOS) (literal)
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#affiliazioni
- Centro Studio Mitocondri e Metabolosmo Energetico, CNR Bari
Università degli Studi Bari (literal)
- Titolo
- Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences (literal)
- Abstract
- The present paper describes AMmtDB, a database collecting the multi-aligned sequences of vertebrate mitochondrial genes coding for proteins and tRNAs, as well as the multiple alignment of the mammalian mtDNA main regulatory region (D-loop) sequences. The genes coding for proteins are multi-aligned based on the translated sequences and both the nucleotide and amino acid multi-alignments are provided. As far as the genes coding for tRNAs are concerned, the multi-alignments based on the primary and the secondary structures are both provided; for the mammalian D-loop multi-alignments we report the conserved regions of the entire D-loop (CSB1, CSB2, CSB3, the central region, ETAS1 and ETAS2) as defined by Sbisa ef al, [Gene (1997), 205, 125-140). A flatfile format for AMmtDB has been designed allowing its implementation in SRS (http://bio-www.ba.cnr.it: 8000/BioWWW/#AMMTDB). Data selected through SRS can be managed using GeneDoc or other programs for the management of multi-aligned data depending on the user's operative system. The multiple alignments have been produced with CLUSTALV and PILEUP programs and then carefully optimized manually. (literal)
- Prodotto di
- Autore CNR
Incoming links:
- Autore CNR di
- Prodotto
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#rivistaDi