Complete nucleotide sequence and genome organization of Olive latent virus 3, a new putative member of the family Tymoviridae (Articolo in rivista)

Type
Label
  • Complete nucleotide sequence and genome organization of Olive latent virus 3, a new putative member of the family Tymoviridae (Articolo in rivista) (literal)
Anno
  • 2010-01-01T00:00:00+01:00 (literal)
Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#doi
  • 10.1016/j.virusres.2010.05.010 (literal)
Alternative label
  • Abdulkader Alabdullah , Angelantonio Minafra, Toufic Elbeaino , Maria Saponari , Vito Savino, Giovanni P. Martelli (2010)
    Complete nucleotide sequence and genome organization of Olive latent virus 3, a new putative member of the family Tymoviridae
    in Virus research (Online)
    (literal)
Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#autori
  • Abdulkader Alabdullah , Angelantonio Minafra, Toufic Elbeaino , Maria Saponari , Vito Savino, Giovanni P. Martelli (literal)
Pagina inizio
  • 10 (literal)
Pagina fine
  • 18 (literal)
Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroVolume
  • 152 (literal)
Rivista
Note
  • ISI Web of Science (WOS) (literal)
Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#affiliazioni
  • Dipartimento di Protezione delle Piante e Microbiologia Applicata, Università degli Studi di Bari, Italy Istituto di Virologia Vegetale del CNR, sezione di Bari, Via Amendola 165/A, 70126 Bari, Italy Istituto Agronomico Mediterraneo di Bari, Via Ceglie 9, 70010 Valenzano (BA), Italy (literal)
Titolo
  • Complete nucleotide sequence and genome organization of Olive latent virus 3, a new putative member of the family Tymoviridae (literal)
Abstract
  • The complete nucleotide sequence and the genome organization were determined of a putative new member of the family Tymoviridae, tentatively named Olive latent virus 3 (OLV-3), recovered in southern Italy from a symptomless olive tree. The sequenced ssRNA genome comprises 7148 nucleotides excluding the poly(A) tail and contains four open reading frames (ORFs). ORF1 encodes a polyprotein of 221.6 kDa in size, containing the conserved signatures of the methyltransferase (MTR), papain-like protease (PRO), helicase (HEL) and RNA-dependent RNA polymerase (RdRp) domains of the replication-associated proteins of positive-strand RNA viruses. ORF2 overlaps completely ORF1 and encodes a putative protein of 43.33 kDa showing limited sequence similarity with the putative movement protein of Maize rayado fino virus (MRFV). ORF3 codes for a protein with predicted molecular mass of 28.46 kDa, identified as the coat protein (CP), whereas ORF4 overlaps ORF3 and encodes a putative protein of 16 kDa with sequence similarity to the p16 and p31 proteins of Citrus sudden death-associated virus (CSDaV) and Grapevine fleck virus (GFkV), respectively. Within the family Tymoviridae, OLV-3 genome has the closest identity level (49-52%) with members of the genus Marafivirus, from which, however, it differs because of the diverse genome organization and the presence of a single type of CP subunits. (literal)
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