http://www.cnr.it/ontology/cnr/individuo/prodotto/ID12946
ExpEdit: A webserver to explore human RNA editing in RNA-Seq experiments (Articolo in rivista)
- Type
- Label
- ExpEdit: A webserver to explore human RNA editing in RNA-Seq experiments (Articolo in rivista) (literal)
- Anno
- 2011-01-01T00:00:00+01:00 (literal)
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#doi
- 10.1093/bioinformatics/btr117 (literal)
- Alternative label
Picardi, Ernesto; D'Antonio, Mattia; Carrabino, Danilo; Castrignanò, Tiziana; Pesole, Graziano (2011)
ExpEdit: A webserver to explore human RNA editing in RNA-Seq experiments
in Bioinformatics (Oxf., Print)
(literal)
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#autori
- Picardi, Ernesto; D'Antonio, Mattia; Carrabino, Danilo; Castrignanò, Tiziana; Pesole, Graziano (literal)
- Pagina inizio
- Pagina fine
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#url
- http://www.scopus.com/record/display.url?eid=2-s2.0-79954542921&origin=inward (literal)
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroVolume
- Rivista
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#numeroFascicolo
- Note
- Scopu (literal)
- ISI Web of Science (WOS) (literal)
- Http://www.cnr.it/ontology/cnr/pubblicazioni.owl#affiliazioni
- Universita degli Studi di Bari; Consorzio interuniversitario per le Applicazioni di Supercalcolo Per Universita e Ricerca; Consiglio Nazionale delle Ricerche (literal)
- Titolo
- ExpEdit: A webserver to explore human RNA editing in RNA-Seq experiments (literal)
- Abstract
- Summary: ExpEdit is a web application for assessing RNA editing in human at known or user-specified sites supported by transcript data obtained by RNA-Seq experiments. Mapping data (in SAM/BAM format) or directly sequence reads [in FASTQ/short read archive (SRA) format] can be provided as input to carry out a comparative analysis against a large collection of known editing sites collected in DARNED database as well as other user-provided potentially edited positions. Results are shown as dynamic tables containing University of California, Santa Cruz (UCSC) links for a quick examination of the genomic context. © The Author 2011. Published by Oxford University Press. All rights reserved. (literal)
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- Autore CNR
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